Improved spectral algorithm for the detection of network communities

We review and improve a recently introduced method for the detection of communities in complex networks. This method combines spectral properties of some matrices encoding the network topology, with well known hierarchical clustering techniques, and the use of the modularity parameter to quantify the goodness of any possible community subdivision. This provides one of the best available methods for the detection of community structures in complex systems.Comment: 4 pages, 1 fugure; to appear in the Proceedings of the 8th Granada Seminar - Computational and Statistical Physic

The mechanisms of arsenic detoxification by the green microalgae chlorella vulgaris

The mechanisms of arsenic interaction with the green microalga Chlorella vulgaris (C. vulgaris) and the potential for its bio-remediation from water were investigated. This was made possible by the development of an improved arsenic extraction from C. vulgaris, leading to successful glutathione and phytochelatins (GSH/PC) complex speciation analysis with 71.1% efficiency. The response of C. vulgaris when challenged by As(III), As(V) and dimethylarsinic acid (DMA) was assessed through experiments on adsorption, efflux and speciation of arsenic (reduction, oxidation, methylation and chelation with GSH/PC). At high phosphate concentration (1.62 mM of PO4-3), poor adsorption of As(V) led to low intracellular uptake; at low phosphate concentration (3.2 μM of PO4-3), an increase in the level of free thiols was observed as well as a moderate decrease in intracellular pH with no evidence for signals of oxidative stress. Chlorella vulgaris cells did not produce any As-GS/PC complex when exposed to As(V). This may indicate that a reduction step is needed for As(V) complexation with GSH/PC. Chlorella vulgaris cells formed DMASV-GS upon exposure to DMA. The formation of this complex in vivo has only been reported once in Brassica oleracea plants. This complex is perhaps a fragment of a bigger molecule and thus part of another detoxification mechanism since its formation was not related to the concentration of DMA in media or the exposure time. It was found that As(III) triggers the formation of arsenic complexes with PC and homophytochelatins (hPC) and their compartmentalisation to vacuoles. It is the first time that, as a result of the newly developed extraction method using sonication, such intact complexes have been identified in C. vulgaris exposed to arsenic and their hPC complexes have been reported in any organism. The potential of C. vulgaris to bio-remediate arsenic from water is highly selective and effective for the more toxic As(III) (for human life) without the potential hazard to reduce As(V) to As(III). This was possible to assess because of the following empirical observations: • At low phosphate (3.2 μM of PO4-3) and in the presence of As(V), C. vulgaris are not likely to grow and be efficient at bio-remediating arsenic. • At high phosphate (1.62 mM of PO4-3) and in the presence of As(V), C. vulgaris are highly likely to grow but are not likely to be efficient at bio-remediating arsenic. However the potential to transform As(V) into more toxic As(III) is very low. • Under any phosphate concentration and in the presence of As(III), C. vulgaris has high potential to bio-remediate arsenic, by storing As(III) into the cell biomass while retaining significantly high growth rates

Disordered graphene Josephson junctions

A tight-binding approach based on the Chebyshev-Bogoliubov-de Gennes method is used to describe disordered single-layer graphene Josephson junctions. Scattering by vacancies, ripples or charged impurities is included. We compute the Josephson current and investigate the nature of multiple Andreev reflections, which induce bound states appearing as peaks in the density of states for energies below the superconducting gap. In the presence of single atom vacancies, we observe a strong suppression of the supercurrent that is a consequence of strong inter-valley scattering. Although lattice deformations should not induce inter-valley scattering, we find that the supercurrent is still suppressed, which is due to the presence of pseudo-magnetic barriers. For charged impurities, we consider two cases depending on whether the average doping is zero, i.e. existence of electron-hole puddles, or finite. In both cases, short range impurities strongly affect the supercurrent, similar to the vacancies scenario

True airspeed measured by airborne laser Doppler velocimeter

Velocimeter utilizing carbon dioxide laser measures true airspeed of aircraft. Results of flight tests indicate that clear-weather airspeeds can be measured with accuracy better than 0.1% at altitudes up to 3000 meters; measurements can be made at much greater altitudes in cloudy or turbid air

Tight-binding description of intrinsic superconducting correlations in multilayer graphene

Using highly efficient GPU-based simulations of the tight-binding Bogoliubov-de Gennes equations we solve self-consistently for the pair correlation in rhombohedral (ABC) and Bernal (ABA) multilayer graphene by considering a finite intrinsic s-wave pairing potential. We find that the two different stacking configurations have opposite bulk/surface behavior for the order parameter. Surface superconductivity is robust for ABC stacked multilayer graphene even at very low pairing potentials for which the bulk order parameter vanishes, in agreement with a recent analytical approach. In contrast, for Bernal stacked multilayer graphene, we find that the order parameter is always suppressed at the surface and that there exists a critical value for the pairing potential below which no superconducting order is achieved. We considered different doping scenarios and find that homogeneous doping strongly suppresses surface superconductivity while non-homogeneous field-induced doping has a much weaker effect on the superconducting order parameter. For multilayer structures with hybrid stacking (ABC and ABA) we find that when the thickness of each region is small (few layers), high-temperature surface superconductivity survives throughout the bulk due to the proximity effect between ABC/ABA interfaces where the order parameter is enhanced.Comment: 7 page

Effect of spin-orbit interaction on a magnetic impurity in the vicinity of a surface

We propose a new mechanism for surface-induced magnetic anisotropy to explain the thickness-dependence of the Kondo resistivity of thin films of dilute magnetic alloys. The surface anisotropy energy, generated by spin-orbit coupling on the magnetic impurity itself, is an oscillating function of the distance d from the surface and decays as 1/d^2. Numerical estimates based on simple models suggest that this mechanism, unlike its alternatives, gives rise to an effect of the desired order of magnitude.Comment: 4 pages, 4 figure